Gene Expression


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DEEP  v.1.0.3

Gene expression analysis made easy. DEEP is a software that takes your data on differential gene expression (i.e.

Katsura  v.1.0.0

Metabolic Pathway Analysis Tool. Overlay gene expression data with this tool. The Katsura tool overlays gene expression data and similar biological data onto metabolic pathways.





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Cytoscape x64  v.3.0.0

Cytoscape x64 is an open source bioinformatics software platform for visualizing molecular interaction networks and biological pathways and integrating these networks with annotations, gene expression profiles and other state data.

SRNA Workbench 2.5.0 Beta  v.1.0

RNA silencing is a complex, highly-conserved, transcriptional and post-transcriptional mechanism that tunes gene expression.

AlleleID  v.7.01

AlleleID is a comprehensive desktop tool designed to address the challenges of pathogen detection, bacterial identification or taxa/species discrimination using microarrays and TaqMan® and molecular beacon qPCR assays.

Amiba  v.1.0

The Gene Expression Programming Framework in Java.

EPTable  v.0.1.1

EPTable is a simple web-based tool to analyze microarray gene expression profiles with additional gene profiles.

Maple Tree  v.0.2.3.2

Maple Tree is a Java based visualization tool used by researchers in the biological sciences to visualize and graphically browse the results of analyses of gene expression data collected from microarray experiments.

Mged  v.1.0

Microarray Gene Expression Database Group and OMG Gene Expression Standard (MAGE)

SysGenSIM  v.1.0.1

SysGenSIM is a bioinformatics toolbox to create artificial gene expression datasets by simulating Systems Genetics experiments.

CLANS  v.2

CLANS is a small tool written in Java for cluster analysis of sequences. Frequently, homology is used as a reason to transfer knowledge about function or structure from known to unknown proteins.

GINsim  v.2.4 Alpha

Qualitative analysis of regulatory graphs: a computational tool based on a discrete formal framework. GINsim is a utility supporting the definition, the simulation and the analysis of regulatory graphs.

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